Genotyp-Identifizierung und Wechselwirkungen an zwei Populus-Chima?ren
Abstract (Summary)
Two Populus graft chimeras (MA and AI) produced of P. x canadensis ‘Marilandica’ (M), P.
maximowizcii x P. trichocarpa ‘Androscoggin’ (A) and P. nigra L. ’Italica’ (I) were used for
investigations of leaf and flower development. In MA the exogenous layer (L1) forms the
epidermis and is derived from M while inner layers (L2, L3 etc.) descend from A whereas in
AI L1 is formed by A while L2, L3 etc. descend from I. The exogenous epidermis of the
periclinal chimeras imposes morphological effects such as an extra female sex in some of the
MA flowers. The morphological characteristics of different plant tissues of parents and
chimera were compared to determine how they were modified or altered by the tissue
transplantation and possibly identify co-existing or interacting genotypes in one tissue.
RAPD-PCR was tested for its usefulness to amplify polymorphic fingerprints including donor
specific DNA fragments. One random 10mer primer (GGAGTGGACA) out of 20 tested
revealed the amplification of patterns including donor specific DNA bands using extracts
from leaf tissues of the M and A parents that were combined using extract from leaf tissue of
the MA chimera. This indicates that the leaves of the MA chimera are formed by tissues of M
and A. However, the inherent disadvantage of RAPD-PCR is the reproducibility of PCR
product generation. Therefore the discriminative potential of the ITS region located between
the rRNA genes was investigated. The application of specific 16S ribosomal DNA (rDNA)
primers for amplification and sequencing of PCR products revealed a closely phylogenetic
relationship between I, M and A. Consequently the ITS1 and ITS2 of nuclear rDNA between
18S and 25S were used. The amplified fragments were purified, cloned in E. coli and
sequenced. Analyses of multiple clones demonstrated extensive paralogy within and between
I, M and A ITS operons. For each parent were at least two rDNA operons as well as multiple
paralogous sequences within operons identified. The use of PCR and sequence analyses
showed that one of the operons encodes a putative expressed (functional) rDNA whereas the
second encodes a pseudogen (truncated) in low copy number. We also characterized the ITS
regions of I, M and A to gain insights into structure and phylogeny of the Salicacaee family.
Based on sequence divergence primers were designed for A and I and used for the
identification of A in MA carpels.
Schlagwörter:
Populus-Pfropfchimären, RAPD-PCR, 16s-rDNA, kernkodierten rDNA (ITS-Regionen)
Bibliographical Information:
Advisor:
School:Oberlin College
School Location:USA - Ohio
Source Type:Master's Thesis
Keywords:
ISBN:
Date of Publication: